Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gjb1P28230 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gjb1P28230 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gjb1P28230 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gjb1P28230 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gjb1P28230 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Gjb1P28230 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gjb1P28230 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.2□□□□□ -0.3
Gjb1P28230 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gjb1P28230 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Gjb1P28230 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 Mir744-201ENSMUST00000103261 100 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Gm11783-201ENSMUST00000119549 885 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Gm13445-201ENSMUST00000121664 307 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.19□□□□□ -0.3
Gjb1P28230 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gjb1P28230 Gm43380-201ENSMUST00000200421 220 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC13.19□□□□□ -0.3
Gjb1P28230 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.19□□□□□ -0.3
Gjb1P28230 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.19□□□□□ -0.3
Gjb1P28230 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gjb1P28230 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gjb1P28230 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Gjb1P28230 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.18□□□□□ -0.3
Gjb1P28230 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gjb1P28230 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.18□□□□□ -0.3
Gjb1P28230 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
Gjb1P28230 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Gm11957-201ENSMUST00000118304 779 ntBASIC13.18□□□□□ -0.3
Gjb1P28230 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.18□□□□□ -0.3
Gjb1P28230 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.18□□□□□ -0.3
Gjb1P28230 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.18□□□□□ -0.3
Gjb1P28230 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gjb1P28230 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Gm43671-201ENSMUST00000200422 433 ntBASIC13.18□□□□□ -0.3
Gjb1P28230 Gm45113-201ENSMUST00000207518 165 ntBASIC13.18□□□□□ -0.3
Gjb1P28230 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.18□□□□□ -0.3
Gjb1P28230 Gm30671-201ENSMUST00000214898 318 ntBASIC13.18□□□□□ -0.3
Gjb1P28230 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Gjb1P28230 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.18□□□□□ -0.3
Gjb1P28230 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gjb1P28230 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms