Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afxP27661 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
H2afxP27661 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afxP27661 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
H2afxP27661 AC160340.2-201ENSMUST00000220812 3675 ntBASIC12.31□□□□□ -0.44
H2afxP27661 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H2afxP27661 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afxP27661 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afxP27661 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.31□□□□□ -0.44
H2afxP27661 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Gm6114-201ENSMUST00000182472 968 ntBASIC12.31□□□□□ -0.44
H2afxP27661 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
H2afxP27661 Gm37497-201ENSMUST00000195830 798 ntBASIC12.31□□□□□ -0.44
H2afxP27661 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.31□□□□□ -0.44
H2afxP27661 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afxP27661 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afxP27661 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.31□□□□□ -0.44
H2afxP27661 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H2afxP27661 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afxP27661 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afxP27661 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H2afxP27661 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.3□□□□□ -0.44
H2afxP27661 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.3□□□□□ -0.44
H2afxP27661 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Gm42937-201ENSMUST00000197360 752 ntBASIC12.3□□□□□ -0.44
H2afxP27661 Gm42612-201ENSMUST00000197986 623 ntBASIC12.3□□□□□ -0.44
H2afxP27661 Gm43170-201ENSMUST00000199827 612 ntBASIC12.3□□□□□ -0.44
H2afxP27661 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.3□□□□□ -0.44
H2afxP27661 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.3□□□□□ -0.44
H2afxP27661 Gm19163-201ENSMUST00000223313 780 ntBASIC12.3□□□□□ -0.44
H2afxP27661 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.3□□□□□ -0.44
H2afxP27661 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.3□□□□□ -0.44
H2afxP27661 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
H2afxP27661 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afxP27661 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afxP27661 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afxP27661 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afxP27661 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afxP27661 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
H2afxP27661 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.29□□□□□ -0.44
H2afxP27661 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afxP27661 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
H2afxP27661 Gm8213-201ENSMUST00000118191 441 ntBASIC12.29□□□□□ -0.44
H2afxP27661 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.29□□□□□ -0.44
H2afxP27661 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
H2afxP27661 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afxP27661 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms