Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pde6bP23440 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.99□□□□□ -0.33
Pde6bP23440 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pde6bP23440 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.99□□□□□ -0.33
Pde6bP23440 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Gm27530-201ENSMUST00000184096 98 ntBASIC12.99□□□□□ -0.33
Pde6bP23440 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.99□□□□□ -0.33
Pde6bP23440 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Gm9132-201ENSMUST00000210182 832 ntBASIC12.99□□□□□ -0.33
Pde6bP23440 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.99□□□□□ -0.33
Pde6bP23440 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.99□□□□□ -0.33
Pde6bP23440 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pde6bP23440 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pde6bP23440 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6bP23440 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.98□□□□□ -0.33
Pde6bP23440 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pde6bP23440 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pde6bP23440 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.98□□□□□ -0.33
Pde6bP23440 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.98□□□□□ -0.33
Pde6bP23440 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pde6bP23440 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pde6bP23440 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Gm11660-201ENSMUST00000120955 412 ntBASIC12.98□□□□□ -0.33
Pde6bP23440 Gm12164-201ENSMUST00000121695 551 ntBASIC12.98□□□□□ -0.33
Pde6bP23440 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.98□□□□□ -0.33
Pde6bP23440 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.98□□□□□ -0.33
Pde6bP23440 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.98□□□□□ -0.33
Pde6bP23440 Gm45398-201ENSMUST00000210561 165 ntBASIC12.98□□□□□ -0.33
Pde6bP23440 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.98□□□□□ -0.33
Pde6bP23440 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pde6bP23440 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pde6bP23440 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.98□□□□□ -0.33
Pde6bP23440 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.98□□□□□ -0.33
Pde6bP23440 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pde6bP23440 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pde6bP23440 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6bP23440 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pde6bP23440 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm15573-201ENSMUST00000119487 540 ntBASIC12.97□□□□□ -0.33
Pde6bP23440 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.97□□□□□ -0.33
Pde6bP23440 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.97□□□□□ -0.33
Pde6bP23440 Gm45219-201ENSMUST00000205602 465 ntBASIC12.97□□□□□ -0.33
Pde6bP23440 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6bP23440 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.97□□□□□ -0.33
Pde6bP23440 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6bP23440 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pde6bP23440 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms