Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.78□□□□□ -0.68
Cbx3P23198 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Gm15376-201ENSMUST00000122258 783 ntBASIC10.78□□□□□ -0.68
Cbx3P23198 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.78□□□□□ -0.68
Cbx3P23198 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.78□□□□□ -0.68
Cbx3P23198 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cbx3P23198 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cbx3P23198 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cbx3P23198 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cbx3P23198 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.77□□□□□ -0.68
Cbx3P23198 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cbx3P23198 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cbx3P23198 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cbx3P23198 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cbx3P23198 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Cbx3P23198 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Cbx3P23198 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Cbx3P23198 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.77□□□□□ -0.69
Cbx3P23198 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.77□□□□□ -0.69
Cbx3P23198 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.77□□□□□ -0.69
Cbx3P23198 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.77□□□□□ -0.69
Cbx3P23198 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.77□□□□□ -0.69
Cbx3P23198 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Cbx3P23198 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.77□□□□□ -0.69
Cbx3P23198 Gm29608-201ENSMUST00000190444 463 ntBASIC10.77□□□□□ -0.69
Cbx3P23198 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.77□□□□□ -0.69
Cbx3P23198 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Cbx3P23198 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.77□□□□□ -0.69
Cbx3P23198 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.77□□□□□ -0.69
Cbx3P23198 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cbx3P23198 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cbx3P23198 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cbx3P23198 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Cbx3P23198 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cbx3P23198 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cbx3P23198 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Cbx3P23198 Gm37307-201ENSMUST00000193663 2621 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Gm42826-201ENSMUST00000197548 2639 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cbx3P23198 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.76□□□□□ -0.69
Cbx3P23198 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cbx3P23198 Gm38169-201ENSMUST00000191822 2539 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Gm42608-201ENSMUST00000197563 2018 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Gm15321-201ENSMUST00000121290 288 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Gm16215-201ENSMUST00000161990 637 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.76□□□□□ -0.69
Cbx3P23198 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Gm18307-201ENSMUST00000206864 949 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.76□□□□□ -0.69
Cbx3P23198 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.76□□□□□ -0.69
Cbx3P23198 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.76□□□□□ -0.69
Cbx3P23198 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cbx3P23198 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Cbx3P23198 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms