Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
BdnfP21237 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Snora78-201ENSMUST00000158630 128 ntBASIC11.39□□□□□ -0.59
BdnfP21237 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.39□□□□□ -0.59
BdnfP21237 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
BdnfP21237 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.39□□□□□ -0.59
BdnfP21237 Gm18164-201ENSMUST00000213769 927 ntBASIC11.39□□□□□ -0.59
BdnfP21237 Gm18166-201ENSMUST00000215557 927 ntBASIC11.39□□□□□ -0.59
BdnfP21237 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.39□□□□□ -0.59
BdnfP21237 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
BdnfP21237 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.39□□□□□ -0.59
BdnfP21237 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.39□□□□□ -0.59
BdnfP21237 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
BdnfP21237 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
BdnfP21237 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gm10434-201ENSMUST00000101158 471 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Gm23912-201ENSMUST00000104687 87 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Mir1247-201ENSMUST00000116706 82 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.38□□□□□ -0.59
BdnfP21237 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gm25043-201ENSMUST00000158604 212 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.38□□□□□ -0.59
BdnfP21237 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
BdnfP21237 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Gm38002-201ENSMUST00000193255 180 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Gm42693-201ENSMUST00000196779 631 ntBASIC11.38□□□□□ -0.59
BdnfP21237 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gm9823-201ENSMUST00000051212 327 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gm45354-201ENSMUST00000199820 2557 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.38□□□□□ -0.59
BdnfP21237 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.38□□□□□ -0.59
BdnfP21237 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.38□□□□□ -0.59
BdnfP21237 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
BdnfP21237 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
BdnfP21237 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.37□□□□□ -0.59
BdnfP21237 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
BdnfP21237 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
BdnfP21237 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms