Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RaraP11416 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.79□□□□□ -0.36
RaraP11416 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RaraP11416 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RaraP11416 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.78□□□□□ -0.36
RaraP11416 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.78□□□□□ -0.36
RaraP11416 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RaraP11416 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Gm14127-201ENSMUST00000117906 678 ntBASIC12.78□□□□□ -0.36
RaraP11416 Gm11222-201ENSMUST00000119005 738 ntBASIC12.78□□□□□ -0.36
RaraP11416 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RaraP11416 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.78□□□□□ -0.36
RaraP11416 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.78□□□□□ -0.36
RaraP11416 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.78□□□□□ -0.36
RaraP11416 Gzmn-202ENSMUST00000225535 989 ntBASIC12.78□□□□□ -0.36
RaraP11416 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RaraP11416 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RaraP11416 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.78□□□□□ -0.36
RaraP11416 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RaraP11416 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RaraP11416 Erich3-203ENSMUST00000189969 3460 ntBASIC12.78□□□□□ -0.36
RaraP11416 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RaraP11416 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.78□□□□□ -0.36
RaraP11416 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.78□□□□□ -0.36
RaraP11416 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RaraP11416 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.78□□□□□ -0.36
RaraP11416 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RaraP11416 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RaraP11416 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
RaraP11416 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RaraP11416 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
RaraP11416 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RaraP11416 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RaraP11416 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RaraP11416 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RaraP11416 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.77□□□□□ -0.36
RaraP11416 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.77□□□□□ -0.36
RaraP11416 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RaraP11416 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RaraP11416 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.77□□□□□ -0.37
RaraP11416 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RaraP11416 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RaraP11416 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RaraP11416 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RaraP11416 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RaraP11416 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RaraP11416 Gm12742-201ENSMUST00000117326 410 ntBASIC12.77□□□□□ -0.37
RaraP11416 Gm11930-201ENSMUST00000117788 190 ntBASIC12.77□□□□□ -0.37
RaraP11416 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Gm14726-201ENSMUST00000120623 896 ntBASIC12.77□□□□□ -0.37
RaraP11416 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.77□□□□□ -0.37
RaraP11416 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.77□□□□□ -0.37
RaraP11416 Gm17420-201ENSMUST00000164753 153 ntBASIC12.77□□□□□ -0.37
RaraP11416 Gm2991-201ENSMUST00000173338 480 ntBASIC12.77□□□□□ -0.37
RaraP11416 Gm8885-201ENSMUST00000189382 598 ntBASIC12.77□□□□□ -0.37
RaraP11416 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.77□□□□□ -0.37
RaraP11416 Gm31256-201ENSMUST00000194705 506 ntBASIC12.77□□□□□ -0.37
RaraP11416 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.77□□□□□ -0.37
RaraP11416 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.77□□□□□ -0.37
RaraP11416 Gm6334-201ENSMUST00000207083 228 ntBASIC12.77□□□□□ -0.37
RaraP11416 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.77□□□□□ -0.37
RaraP11416 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.77□□□□□ -0.37
RaraP11416 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.77□□□□□ -0.37
RaraP11416 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.77□□□□□ -0.37
RaraP11416 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RaraP11416 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms