Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ccl3P10855 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ccl3P10855 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Gm14807-201ENSMUST00000116640 983 ntBASIC10.43□□□□□ -0.74
Ccl3P10855 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.43□□□□□ -0.74
Ccl3P10855 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Mir8093-201ENSMUST00000185043 137 ntBASIC10.43□□□□□ -0.74
Ccl3P10855 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.43□□□□□ -0.74
Ccl3P10855 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.43□□□□□ -0.74
Ccl3P10855 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.43□□□□□ -0.74
Ccl3P10855 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.43□□□□□ -0.74
Ccl3P10855 Gm4978-201ENSMUST00000071565 801 ntBASIC10.43□□□□□ -0.74
Ccl3P10855 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ccl3P10855 Gm25201-201ENSMUST00000083093 170 ntBASIC10.43□□□□□ -0.74
Ccl3P10855 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ccl3P10855 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccl3P10855 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl3P10855 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Ccl3P10855 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccl3P10855 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC10.42□□□□□ -0.74
Ccl3P10855 Gm11980-201ENSMUST00000121445 986 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 Gm10169-201ENSMUST00000121822 348 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 Gm14441-201ENSMUST00000121960 540 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.42□□□□□ -0.74
Ccl3P10855 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl3P10855 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccl3P10855 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.42□□□□□ -0.74
Ccl3P10855 Gm9135-201ENSMUST00000182963 990 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 Gm42816-201ENSMUST00000198433 325 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 Gm3726-201ENSMUST00000203110 785 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 Gm35713-201ENSMUST00000210516 199 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccl3P10855 Gm9111-201ENSMUST00000219394 709 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccl3P10855 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.42□□□□□ -0.74
Ccl3P10855 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccl3P10855 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccl3P10855 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ccl3P10855 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.42□□□□□ -0.74
Ccl3P10855 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl3P10855 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ccl3P10855 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ccl3P10855 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Ccl3P10855 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ccl3P10855 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Ccl3P10855 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms