Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
TnfP06804 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Gm14585-201ENSMUST00000120713 634 ntBASIC12.55□□□□□ -0.4
TnfP06804 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.55□□□□□ -0.4
TnfP06804 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Gm3150-201ENSMUST00000166418 204 ntBASIC12.55□□□□□ -0.4
TnfP06804 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TnfP06804 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.55□□□□□ -0.4
TnfP06804 Gm23045-201ENSMUST00000175041 96 ntBASIC12.55□□□□□ -0.4
TnfP06804 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.55□□□□□ -0.4
TnfP06804 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.55□□□□□ -0.4
TnfP06804 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.55□□□□□ -0.4
TnfP06804 Gm43186-201ENSMUST00000198130 824 ntBASIC12.55□□□□□ -0.4
TnfP06804 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.55□□□□□ -0.4
TnfP06804 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.55□□□□□ -0.4
TnfP06804 Gm44506-201ENSMUST00000206278 965 ntBASIC12.55□□□□□ -0.4
TnfP06804 Gm6108-201ENSMUST00000208365 367 ntBASIC12.55□□□□□ -0.4
TnfP06804 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.55□□□□□ -0.4
TnfP06804 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.55□□□□□ -0.4
TnfP06804 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.55□□□□□ -0.4
TnfP06804 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.55□□□□□ -0.4
TnfP06804 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TnfP06804 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.55□□□□□ -0.4
TnfP06804 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.55□□□□□ -0.4
TnfP06804 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TnfP06804 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.54□□□□□ -0.4
TnfP06804 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TnfP06804 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TnfP06804 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TnfP06804 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TnfP06804 Gm22711-201ENSMUST00000116890 133 ntBASIC12.54□□□□□ -0.4
TnfP06804 Gm11836-201ENSMUST00000121022 441 ntBASIC12.54□□□□□ -0.4
TnfP06804 Gm8737-201ENSMUST00000122208 642 ntBASIC12.54□□□□□ -0.4
TnfP06804 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.54□□□□□ -0.4
TnfP06804 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.54□□□□□ -0.4
TnfP06804 Gm26047-201ENSMUST00000157308 113 ntBASIC12.54□□□□□ -0.4
TnfP06804 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TnfP06804 Gm18367-201ENSMUST00000176139 600 ntBASIC12.54□□□□□ -0.4
TnfP06804 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.54□□□□□ -0.4
TnfP06804 Gm12407-201ENSMUST00000180219 324 ntBASIC12.54□□□□□ -0.4
TnfP06804 Gm4654-201ENSMUST00000183305 982 ntBASIC12.54□□□□□ -0.4
TnfP06804 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.54□□□□□ -0.4
TnfP06804 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.54□□□□□ -0.4
TnfP06804 Gm26047-202ENSMUST00000198840 115 ntBASIC12.54□□□□□ -0.4
TnfP06804 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TnfP06804 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.54□□□□□ -0.4
TnfP06804 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.54□□□□□ -0.4
TnfP06804 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TnfP06804 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TnfP06804 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TnfP06804 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TnfP06804 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.54□□□□□ -0.4
TnfP06804 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TnfP06804 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TnfP06804 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TnfP06804 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.53□□□□□ -0.4
TnfP06804 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.53□□□□□ -0.4
TnfP06804 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TnfP06804 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TnfP06804 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms