Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm9062-201ENSMUST00000117712 727 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm15595-201ENSMUST00000120840 961 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.66□□□□□ -0.54
Hoxa4P06798 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm18827-201ENSMUST00000188341 790 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm37835-201ENSMUST00000193305 361 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm45113-201ENSMUST00000207518 165 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Spcs1-203ENSMUST00000226374 592 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.66□□□□□ -0.54
Hoxa4P06798 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hoxa4P06798 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hoxa4P06798 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm14193-201ENSMUST00000105067 153 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm22711-201ENSMUST00000116890 133 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm12579-201ENSMUST00000118040 783 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm43378-201ENSMUST00000199336 582 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm1821-202ENSMUST00000227415 750 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Hoxa4P06798 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.65□□□□□ -0.54
Hoxa4P06798 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Hoxa4P06798 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hoxa4P06798 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms