Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.18□□□□□ -0.46
CopeO89079 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CopeO89079 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.18□□□□□ -0.46
CopeO89079 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CopeO89079 Gm12164-201ENSMUST00000121695 551 ntBASIC12.18□□□□□ -0.46
CopeO89079 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.18□□□□□ -0.46
CopeO89079 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.18□□□□□ -0.46
CopeO89079 Gm24845-201ENSMUST00000158034 109 ntBASIC12.18□□□□□ -0.46
CopeO89079 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.18□□□□□ -0.46
CopeO89079 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Gm27731-201ENSMUST00000185192 107 ntBASIC12.18□□□□□ -0.46
CopeO89079 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.18□□□□□ -0.46
CopeO89079 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.18□□□□□ -0.46
CopeO89079 Gm19994-201ENSMUST00000217086 586 ntBASIC12.18□□□□□ -0.46
CopeO89079 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.18□□□□□ -0.46
CopeO89079 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CopeO89079 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.18□□□□□ -0.46
CopeO89079 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
CopeO89079 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CopeO89079 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.18□□□□□ -0.46
CopeO89079 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CopeO89079 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopeO89079 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.18□□□□□ -0.46
CopeO89079 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CopeO89079 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.17□□□□□ -0.46
CopeO89079 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CopeO89079 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.17□□□□□ -0.46
CopeO89079 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CopeO89079 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.17□□□□□ -0.46
CopeO89079 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.17□□□□□ -0.46
CopeO89079 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.17□□□□□ -0.46
CopeO89079 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CopeO89079 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.17□□□□□ -0.46
CopeO89079 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.17□□□□□ -0.46
CopeO89079 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.17□□□□□ -0.46
CopeO89079 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
CopeO89079 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CopeO89079 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.17□□□□□ -0.46
CopeO89079 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CopeO89079 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CopeO89079 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.16□□□□□ -0.46
CopeO89079 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CopeO89079 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Gm4986-201ENSMUST00000119731 549 ntBASIC12.16□□□□□ -0.46
CopeO89079 Gm7722-201ENSMUST00000120646 741 ntBASIC12.16□□□□□ -0.46
CopeO89079 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.16□□□□□ -0.46
CopeO89079 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CopeO89079 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.16□□□□□ -0.46
CopeO89079 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms