Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm6007-201ENSMUST00000208170 823 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm10146-201ENSMUST00000072739 309 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm24526-201ENSMUST00000082921 158 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.76□□□□□ -0.85
Hmgb3O54879 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hmgb3O54879 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hmgb3O54879 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm2231-201ENSMUST00000125661 612 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm38092-201ENSMUST00000195600 653 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.75□□□□□ -0.85
Hmgb3O54879 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hmgb3O54879 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hmgb3O54879 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 239.7 ms