Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Btrc-209ENSMUST00000224478 2194 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Alx4O35137 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.57□□□□□ -0.72
Alx4O35137 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.57□□□□□ -0.72
Alx4O35137 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.57□□□□□ -0.72
Alx4O35137 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Alx4O35137 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Alx4O35137 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Alx4O35137 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.56□□□□□ -0.72
Alx4O35137 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Gm12390-201ENSMUST00000117897 397 ntBASIC10.56□□□□□ -0.72
Alx4O35137 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.56□□□□□ -0.72
Alx4O35137 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Alx4O35137 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Lect2-202ENSMUST00000225183 823 ntBASIC10.56□□□□□ -0.72
Alx4O35137 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.56□□□□□ -0.72
Alx4O35137 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Gm10254-201ENSMUST00000052888 867 ntBASIC10.56□□□□□ -0.72
Alx4O35137 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.56□□□□□ -0.72
Alx4O35137 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.56□□□□□ -0.72
Alx4O35137 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.56□□□□□ -0.72
Alx4O35137 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.56□□□□□ -0.72
Alx4O35137 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Alx4O35137 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Alx4O35137 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Alx4O35137 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Alx4O35137 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.55□□□□□ -0.72
Alx4O35137 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
Alx4O35137 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Alx4O35137 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.55□□□□□ -0.72
Alx4O35137 Gm42627-201ENSMUST00000197347 224 ntBASIC10.55□□□□□ -0.72
Alx4O35137 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.55□□□□□ -0.72
Alx4O35137 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.55□□□□□ -0.72
Alx4O35137 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Alx4O35137 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Alx4O35137 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Alx4O35137 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Alx4O35137 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms