Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf3O08791 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ebf3O08791 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ebf3O08791 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf3O08791 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf3O08791 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.35□□□□□ -0.43
Ebf3O08791 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ebf3O08791 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf3O08791 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ebf3O08791 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf3O08791 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ebf3O08791 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.35□□□□□ -0.43
Ebf3O08791 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf3O08791 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf3O08791 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ebf3O08791 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.34□□□□□ -0.43
Ebf3O08791 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ebf3O08791 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ebf3O08791 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ebf3O08791 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
Ebf3O08791 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ebf3O08791 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ebf3O08791 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.34□□□□□ -0.43
Ebf3O08791 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.34□□□□□ -0.43
Ebf3O08791 Gm8365-201ENSMUST00000197334 648 ntBASIC12.34□□□□□ -0.43
Ebf3O08791 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Gm45219-201ENSMUST00000205602 465 ntBASIC12.34□□□□□ -0.43
Ebf3O08791 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.34□□□□□ -0.43
Ebf3O08791 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ebf3O08791 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ebf3O08791 Map1b-203ENSMUST00000223725 2669 ntBASIC12.34□□□□□ -0.43
Ebf3O08791 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.34□□□□□ -0.43
Ebf3O08791 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ebf3O08791 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ebf3O08791 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Ebf3O08791 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.33□□□□□ -0.43
Ebf3O08791 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.33□□□□□ -0.44
Ebf3O08791 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ebf3O08791 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ebf3O08791 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ebf3O08791 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.33□□□□□ -0.44
Ebf3O08791 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ebf3O08791 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Gm19287-201ENSMUST00000203190 358 ntBASIC12.33□□□□□ -0.44
Ebf3O08791 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.33□□□□□ -0.44
Ebf3O08791 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.33□□□□□ -0.44
Ebf3O08791 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.33□□□□□ -0.44
Ebf3O08791 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.33□□□□□ -0.44
Ebf3O08791 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.33□□□□□ -0.44
Ebf3O08791 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ebf3O08791 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ebf3O08791 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.33□□□□□ -0.44
Ebf3O08791 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ebf3O08791 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ebf3O08791 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ebf3O08791 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ebf3O08791 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms