Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm25545-201ENSMUST00000122673 323 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm43778-201ENSMUST00000199438 199 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm18204-201ENSMUST00000209835 793 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm45500-201ENSMUST00000211676 803 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
B020004C17RikJ3QP07 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm15329-201ENSMUST00000121408 155 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm9081-201ENSMUST00000182346 991 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm44647-201ENSMUST00000207402 428 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
B020004C17RikJ3QP07 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
B020004C17RikJ3QP07 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms