Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Colca2F8VPY8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Colca2F8VPY8 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Colca2F8VPY8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Colca2F8VPY8 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Colca2F8VPY8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Colca2F8VPY8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Gm12389-201ENSMUST00000117696 418 ntBASIC11.14□□□□□ -0.63
Colca2F8VPY8 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Gm25998-201ENSMUST00000175397 53 ntBASIC11.14□□□□□ -0.63
Colca2F8VPY8 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.14□□□□□ -0.63
Colca2F8VPY8 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.14□□□□□ -0.63
Colca2F8VPY8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Colca2F8VPY8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm25562-201ENSMUST00000104608 133 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm13039-201ENSMUST00000118638 794 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm6630-201ENSMUST00000119199 454 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm26368-201ENSMUST00000157826 118 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm9369-201ENSMUST00000196009 733 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm45094-201ENSMUST00000207013 617 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm9487-201ENSMUST00000216600 472 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Matn2-206ENSMUST00000228570 2798 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.13□□□□□ -0.63
Colca2F8VPY8 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Colca2F8VPY8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Colca2F8VPY8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Colca2F8VPY8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Colca2F8VPY8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Colca2F8VPY8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Colca2F8VPY8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Colca2F8VPY8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms