Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube4aE9Q735 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.17□□□□□ -0.14
Ube4aE9Q735 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.17□□□□□ -0.14
Ube4aE9Q735 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Gm17825-201ENSMUST00000206836 794 ntBASIC14.17□□□□□ -0.14
Ube4aE9Q735 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.17□□□□□ -0.14
Ube4aE9Q735 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.17□□□□□ -0.14
Ube4aE9Q735 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube4aE9Q735 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm4294-201ENSMUST00000105169 614 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm14395-201ENSMUST00000120494 563 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm15744-201ENSMUST00000161734 213 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm26134-201ENSMUST00000178484 110 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm37826-201ENSMUST00000195329 322 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm5100-201ENSMUST00000195631 589 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm3793-201ENSMUST00000204973 672 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.16□□□□□ -0.14
Ube4aE9Q735 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.16□□□□□ -0.14
Ube4aE9Q735 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ube4aE9Q735 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms