Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Gm27438-201ENSMUST00000183480 110 ntBASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Srp54bE9PXC0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm14193-201ENSMUST00000105067 153 ntBASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm12579-201ENSMUST00000118040 783 ntBASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm14585-201ENSMUST00000120713 634 ntBASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm38117-201ENSMUST00000194653 939 ntBASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Srp54bE9PXC0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Srp54bE9PXC0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gm8731-201ENSMUST00000118088 412 ntBASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gm15352-201ENSMUST00000118696 270 ntBASIC11.7□□□□□ -0.54
Srp54bE9PXC0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms