Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Defa-ps16-201ENSMUST00000121939 171 ntBASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Gm25394-201ENSMUST00000157338 133 ntBASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Gm2553-201ENSMUST00000215986 605 ntBASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.19□□□□□ -0.78
Dchs1E9PVD3 Gm22661-201ENSMUST00000104192 132 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm5395-201ENSMUST00000121650 915 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm37207-201ENSMUST00000194284 296 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm25569-201ENSMUST00000157175 131 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm27826-201ENSMUST00000175282 255 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm10807-201ENSMUST00000177134 795 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm10580-201ENSMUST00000097985 396 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm10581-201ENSMUST00000097986 231 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm10582-201ENSMUST00000097987 396 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm10583-201ENSMUST00000097988 396 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm13827-201ENSMUST00000148801 372 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm8384-201ENSMUST00000190905 704 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Gm6606-201ENSMUST00000193613 947 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Dchs1E9PVD3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Dchs1E9PVD3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Dchs1E9PVD3 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Dchs1E9PVD3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.17□□□□□ -0.78
Dchs1E9PVD3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms