Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hfm1D3Z4R1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm11475-201ENSMUST00000118482 476 ntBASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm12129-201ENSMUST00000120104 1147 ntBASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm6606-201ENSMUST00000193613 947 ntBASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm43547-201ENSMUST00000197729 328 ntBASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hfm1D3Z4R1 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm9133-201ENSMUST00000118289 540 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm9372-201ENSMUST00000168454 430 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm9102-201ENSMUST00000219250 465 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 CT010480.2-201ENSMUST00000225424 737 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm12461-201ENSMUST00000120231 1239 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm25343-201ENSMUST00000157460 107 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm9204-201ENSMUST00000212641 947 ntBASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hfm1D3Z4R1 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms