Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Paupar-201ENSMUST00000194826 3482 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm37981-201ENSMUST00000194280 535 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm8365-201ENSMUST00000197334 648 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Gm5996-201ENSMUST00000211110 718 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Snora73b-201ENSMUST00000083419 205 ntBASIC12.35□□□□□ -0.43
Scn1aA2APX8 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn1aA2APX8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Gm25076-201ENSMUST00000104098 132 ntBASIC12.34□□□□□ -0.43
Scn1aA2APX8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Gm21778-201ENSMUST00000178779 471 ntBASIC12.34□□□□□ -0.43
Scn1aA2APX8 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.34□□□□□ -0.43
Scn1aA2APX8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.34□□□□□ -0.43
Scn1aA2APX8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.34□□□□□ -0.43
Scn1aA2APX8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1aA2APX8 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Gm12899-201ENSMUST00000120565 551 ntBASIC12.33□□□□□ -0.43
Scn1aA2APX8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1aA2APX8 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.33□□□□□ -0.43
Scn1aA2APX8 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Scn1aA2APX8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1aA2APX8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Scn1aA2APX8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms