Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Gm3096-201ENSMUST00000185770 364 ntBASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc112A0AUP1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gm4607-201ENSMUST00000206649 577 ntBASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc112A0AUP1 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm11511-201ENSMUST00000118146 540 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm11222-201ENSMUST00000119005 738 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm8062-201ENSMUST00000139696 444 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm6963-201ENSMUST00000147879 379 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm5070-201ENSMUST00000177599 862 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms