Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm12164-201ENSMUST00000121695 551 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm3096-201ENSMUST00000185770 364 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 AY702102-202ENSMUST00000194651 1173 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm18054-201ENSMUST00000207539 555 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm18935-201ENSMUST00000212692 664 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.78□□□□□ -0.52
Ccdc194A0A140LIT1 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc194A0A140LIT1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Ccdc194A0A140LIT1 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc194A0A140LIT1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc194A0A140LIT1 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc194A0A140LIT1 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc194A0A140LIT1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc194A0A140LIT1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gm14441-201ENSMUST00000121960 540 ntBASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gm6114-201ENSMUST00000182472 968 ntBASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gm8712-201ENSMUST00000221090 701 ntBASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc194A0A140LIT1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms