Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm11331-201ENSMUST00000119764 288 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm9630-201ENSMUST00000178304 885 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm27627-201ENSMUST00000183644 150 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm29615-201ENSMUST00000185371 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm28224-201ENSMUST00000186078 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm29001-201ENSMUST00000186177 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm28292-201ENSMUST00000186593 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm28101-201ENSMUST00000187608 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm29076-201ENSMUST00000187689 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm28302-201ENSMUST00000187931 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm28646-201ENSMUST00000188220 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm28205-201ENSMUST00000189177 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm29032-201ENSMUST00000189797 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm28695-201ENSMUST00000190300 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm37448-201ENSMUST00000192795 697 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm7003-201ENSMUST00000195089 312 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm42937-201ENSMUST00000197360 752 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm43378-201ENSMUST00000199336 582 ntBASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mrpl40Q9Z2Q5 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm19187-201ENSMUST00000206781 892 ntBASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mrpl40Q9Z2Q5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm14263-201ENSMUST00000117955 746 ntBASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.93□□□□□ -0.5
Mrpl40Q9Z2Q5 Gm37986-201ENSMUST00000193285 383 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms