Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Gm13736-201ENSMUST00000119272 253 ntBASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Gm13342-201ENSMUST00000121055 207 ntBASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Crlf3Q9Z2L7 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm25927-201ENSMUST00000175058 117 ntBASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm43179-201ENSMUST00000198797 275 ntBASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm19309-201ENSMUST00000218295 205 ntBASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Snora73a-201ENSMUST00000082453 205 ntBASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Crlf3Q9Z2L7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Gm24934-201ENSMUST00000103764 111 ntBASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Crlf3Q9Z2L7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms