Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm5523-201ENSMUST00000180415 997 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Gm44506-201ENSMUST00000206278 965 ntBASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Scn8aQ9WTU3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm15615-201ENSMUST00000118876 198 ntBASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm8737-201ENSMUST00000122208 642 ntBASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm9463-201ENSMUST00000206707 601 ntBASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm17825-201ENSMUST00000206836 794 ntBASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm8342-201ENSMUST00000209839 757 ntBASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scn8aQ9WTU3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Snora73b-201ENSMUST00000083419 205 ntBASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Gm3508-201ENSMUST00000186012 792 ntBASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn8aQ9WTU3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms