Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm12260-201ENSMUST00000122447 411 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm24158-201ENSMUST00000175263 71 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm29608-201ENSMUST00000190444 463 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm45683-201ENSMUST00000210825 1247 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm6458-201ENSMUST00000211573 635 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Shd-206ENSMUST00000225145 998 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Smco4Q9JIS3 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gm3436-201ENSMUST00000179930 840 ntBASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gm17795-201ENSMUST00000214505 757 ntBASIC9.43□□□□□ -0.9
Smco4Q9JIS3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Smco4Q9JIS3 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms