Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdc40Q9DC48 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm11989-201ENSMUST00000117240 672 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm11362-201ENSMUST00000118838 850 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm12266-201ENSMUST00000120311 962 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm28071-201ENSMUST00000190355 478 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm37986-201ENSMUST00000193285 383 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Gm8959-201ENSMUST00000213150 571 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdc40Q9DC48 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm15711-201ENSMUST00000118889 535 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm17040-202ENSMUST00000170597 889 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm20426-201ENSMUST00000173657 440 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm27552-201ENSMUST00000183351 62 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm27844-201ENSMUST00000183613 62 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms