Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Nudt18-202ENSMUST00000228554 3619 ntBASIC15.57■□□□□ 0.08
U2af1Q9D883 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
U2af1Q9D883 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC15.57■□□□□ 0.08
U2af1Q9D883 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Gm15432-201ENSMUST00000121106 195 ntBASIC15.57■□□□□ 0.08
U2af1Q9D883 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.57■□□□□ 0.08
U2af1Q9D883 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.57■□□□□ 0.08
U2af1Q9D883 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
U2af1Q9D883 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.57■□□□□ 0.08
U2af1Q9D883 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
U2af1Q9D883 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
U2af1Q9D883 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Gm13916-201ENSMUST00000117368 628 ntBASIC15.56■□□□□ 0.08
U2af1Q9D883 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.56■□□□□ 0.08
U2af1Q9D883 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.56■□□□□ 0.08
U2af1Q9D883 Gm37835-201ENSMUST00000193305 361 ntBASIC15.56■□□□□ 0.08
U2af1Q9D883 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
U2af1Q9D883 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.56■□□□□ 0.08
U2af1Q9D883 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
U2af1Q9D883 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
U2af1Q9D883 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
U2af1Q9D883 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
U2af1Q9D883 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC15.55■□□□□ 0.08
U2af1Q9D883 Gm15566-201ENSMUST00000121130 590 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.55■□□□□ 0.08
U2af1Q9D883 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
U2af1Q9D883 Gm10774-201ENSMUST00000188689 204 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Gm45113-201ENSMUST00000207518 165 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 Gm7940-201ENSMUST00000218195 769 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.55■□□□□ 0.08
U2af1Q9D883 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC15.55■□□□□ 0.08
U2af1Q9D883 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms