Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Mir6956-201ENSMUST00000183598 62 ntBASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Gm28631-201ENSMUST00000190740 334 ntBASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sf3a3Q9D554 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm23119-201ENSMUST00000158610 140 ntBASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm19163-201ENSMUST00000223313 780 ntBASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sf3a3Q9D554 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.92□□□□□ -0.5
Sf3a3Q9D554 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Gm12203-201ENSMUST00000118235 598 ntBASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Gm12209-201ENSMUST00000120089 596 ntBASIC11.92□□□□□ -0.5
Sf3a3Q9D554 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sf3a3Q9D554 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms