Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ssbp3Q9D032 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm12501-201ENSMUST00000119163 529 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm15610-201ENSMUST00000120584 195 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm21156-201ENSMUST00000189693 869 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm43378-201ENSMUST00000199336 582 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 AU022133-201ENSMUST00000200601 873 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm807-202ENSMUST00000224929 408 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.92□□□□□ -0.82
Ssbp3Q9D032 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm23596-201ENSMUST00000104304 132 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm12164-201ENSMUST00000121695 551 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 B9d1os-201ENSMUST00000137010 674 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm8343-201ENSMUST00000182705 994 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Mir6979-201ENSMUST00000183927 56 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm44124-201ENSMUST00000204159 472 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm21811-201ENSMUST00000096485 930 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Gm37744-201ENSMUST00000194616 1590 ntBASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp3Q9D032 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms