Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snf8Q9CZ28 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Snora78-201ENSMUST00000158630 128 ntBASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.19□□□□□ -0.46
Snf8Q9CZ28 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snf8Q9CZ28 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Gm7722-201ENSMUST00000120646 741 ntBASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Gm27514-201ENSMUST00000183692 110 ntBASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Gm42627-201ENSMUST00000197347 224 ntBASIC12.18□□□□□ -0.46
Snf8Q9CZ28 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Snf8Q9CZ28 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms