Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.92□□□□□ -0.18
Smc3Q9CW03 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.92□□□□□ -0.18
Smc3Q9CW03 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smc3Q9CW03 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm14644-201ENSMUST00000116671 647 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm11700-201ENSMUST00000119409 403 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm9230-201ENSMUST00000188228 532 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm18054-201ENSMUST00000207539 555 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm30285-201ENSMUST00000214614 422 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.91□□□□□ -0.18
Smc3Q9CW03 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc3Q9CW03 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Gm8062-201ENSMUST00000139696 444 ntBASIC13.9□□□□□ -0.18
Smc3Q9CW03 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Gm6114-201ENSMUST00000182472 968 ntBASIC13.9□□□□□ -0.18
Smc3Q9CW03 Gm27572-201ENSMUST00000183702 255 ntBASIC13.9□□□□□ -0.18
Smc3Q9CW03 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smc3Q9CW03 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms