Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Otud1Q9CUB6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm37246-201ENSMUST00000192665 835 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm43906-201ENSMUST00000203194 906 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 AC162940.1-201ENSMUST00000224745 1167 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.33□□□□□ -0.6
Otud1Q9CUB6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Otud1Q9CUB6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm13035-201ENSMUST00000117496 342 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm12501-201ENSMUST00000119163 529 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm11331-201ENSMUST00000119764 288 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm15610-201ENSMUST00000120584 195 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm8581-201ENSMUST00000188636 890 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm28766-201ENSMUST00000191086 234 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Ighv10-4-201ENSMUST00000193702 299 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm3786-201ENSMUST00000202659 378 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Gm21811-201ENSMUST00000096485 930 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms