Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Q9CQC3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Q9CQC3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Q9CQC3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Q9CQC3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Q9CQC3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.28□□□□□ -0.44
Q9CQC3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Q9CQC3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Mir8093-201ENSMUST00000185043 137 ntBASIC12.28□□□□□ -0.44
Q9CQC3 Gm5982-201ENSMUST00000196234 512 ntBASIC12.28□□□□□ -0.44
Q9CQC3 Gm43002-201ENSMUST00000200310 155 ntBASIC12.28□□□□□ -0.44
Q9CQC3 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.28□□□□□ -0.44
Q9CQC3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.28□□□□□ -0.44
Q9CQC3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.28□□□□□ -0.44
Q9CQC3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.28□□□□□ -0.44
Q9CQC3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.28□□□□□ -0.44
Q9CQC3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Q9CQC3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Q9CQC3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Q9CQC3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.27□□□□□ -0.44
Q9CQC3 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Q9CQC3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.27□□□□□ -0.44
Q9CQC3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Q9CQC3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Q9CQC3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Q9CQC3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.27□□□□□ -0.45
Q9CQC3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Q9CQC3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.27□□□□□ -0.45
Q9CQC3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Gm807-202ENSMUST00000224929 408 ntBASIC12.27□□□□□ -0.45
Q9CQC3 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.27□□□□□ -0.45
Q9CQC3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Q9CQC3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Q9CQC3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Q9CQC3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Q9CQC3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.26□□□□□ -0.45
Q9CQC3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.26□□□□□ -0.45
Q9CQC3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Q9CQC3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.26□□□□□ -0.45
Q9CQC3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Gm16505-201ENSMUST00000179981 232 ntBASIC12.26□□□□□ -0.45
Q9CQC3 Gm8385-201ENSMUST00000058999 643 ntBASIC12.26□□□□□ -0.45
Q9CQC3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Q9CQC3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.26□□□□□ -0.45
Q9CQC3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.26□□□□□ -0.45
Q9CQC3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.26□□□□□ -0.45
Q9CQC3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.26□□□□□ -0.45
Q9CQC3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.26□□□□□ -0.45
Q9CQC3 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.26□□□□□ -0.45
Q9CQC3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Q9CQC3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Q9CQC3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms