Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm4157-201ENSMUST00000211647 679 ntBASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Gm9257-201ENSMUST00000221254 232 ntBASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Gm5705-201ENSMUST00000066241 711 ntBASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpa3Q9CQ71 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Gm24749-201ENSMUST00000157838 343 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Gm18212-201ENSMUST00000211678 889 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Gm8385-201ENSMUST00000058999 643 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpa3Q9CQ71 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm15004-201ENSMUST00000119192 630 ntBASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm14017-201ENSMUST00000121934 386 ntBASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm14441-201ENSMUST00000121960 540 ntBASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm8343-201ENSMUST00000182705 994 ntBASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Mir7677-201ENSMUST00000184226 67 ntBASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm18038-201ENSMUST00000197900 485 ntBASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpa3Q9CQ71 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms