Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm23439-201ENSMUST00000104292 132 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm11736-201ENSMUST00000121468 505 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm26119-201ENSMUST00000175601 104 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm9644-201ENSMUST00000212828 1183 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm7589-201ENSMUST00000085631 534 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.08□□□□□ -0.31
Pcdh15Q99PJ1 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh15Q99PJ1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh15Q99PJ1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh15Q99PJ1 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gm25394-201ENSMUST00000157338 133 ntBASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gm19246-201ENSMUST00000173599 255 ntBASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Cd9-ps-201ENSMUST00000174687 650 ntBASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gm26875-201ENSMUST00000181006 950 ntBASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gm5040-201ENSMUST00000218609 800 ntBASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 AC154407.1-201ENSMUST00000226777 526 ntBASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh15Q99PJ1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Ighv13-1-201ENSMUST00000103480 294 ntBASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Gm22495-201ENSMUST00000104492 126 ntBASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Gm6612-201ENSMUST00000170777 395 ntBASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Wbp1-209ENSMUST00000205023 716 ntBASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 AC117769.1-201ENSMUST00000224716 1120 ntBASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 AC121567.1-201ENSMUST00000227213 842 ntBASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh15Q99PJ1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms