Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdh23Q99PF4 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gm43811-201ENSMUST00000202862 695 ntBASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gm18001-201ENSMUST00000212023 688 ntBASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Mir7051-201ENSMUST00000184167 73 ntBASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gm42751-201ENSMUST00000198065 559 ntBASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh23Q99PF4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Mir341-201ENSMUST00000093593 96 ntBASIC11.71□□□□□ -0.54
Cdh23Q99PF4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.71□□□□□ -0.54
Cdh23Q99PF4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh23Q99PF4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.7□□□□□ -0.54
Cdh23Q99PF4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Gm42660-201ENSMUST00000197733 947 ntBASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh23Q99PF4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms