Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gm2553-201ENSMUST00000215986 605 ntBASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Gm8100-201ENSMUST00000182906 988 ntBASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Gm35960-201ENSMUST00000202712 767 ntBASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gtf2ird2Q99NI3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Gtf2ird2Q99NI3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Gm24891-201ENSMUST00000104391 136 ntBASIC12.2□□□□□ -0.46
Gtf2ird2Q99NI3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms