Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Gm14270-201ENSMUST00000118388 846 ntBASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Mir432-201ENSMUST00000157230 75 ntBASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Gm45575-201ENSMUST00000210283 548 ntBASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Gm12314-201ENSMUST00000118104 538 ntBASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col25a1Q99MQ5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Col25a1Q99MQ5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col25a1Q99MQ5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col25a1Q99MQ5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Col25a1Q99MQ5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col25a1Q99MQ5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Gm8731-201ENSMUST00000118088 412 ntBASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Gm15815-201ENSMUST00000120569 255 ntBASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Gm11952-201ENSMUST00000121172 821 ntBASIC12.33□□□□□ -0.44
Col25a1Q99MQ5 Gm22379-201ENSMUST00000157480 131 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms