Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk5rap3Q99LM2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Gm37489-201ENSMUST00000191883 159 ntBASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cdk5rap3Q99LM2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdk5rap3Q99LM2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cdk5rap3Q99LM2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdk5rap3Q99LM2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdk5rap3Q99LM2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cdk5rap3Q99LM2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cdk5rap3Q99LM2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdk5rap3Q99LM2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdk5rap3Q99LM2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Gm14644-201ENSMUST00000116671 647 ntBASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Gm6114-201ENSMUST00000182472 968 ntBASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Gm37424-201ENSMUST00000191727 561 ntBASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Cdk5rap3Q99LM2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm11989-201ENSMUST00000117240 672 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm11362-201ENSMUST00000118838 850 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm11700-201ENSMUST00000119409 403 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm26956-201ENSMUST00000182176 986 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm29396-201ENSMUST00000185659 716 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm9230-201ENSMUST00000188228 532 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm10608-202ENSMUST00000213924 676 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm8712-201ENSMUST00000221090 701 ntBASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Gm10312-201ENSMUST00000078515 489 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms