Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.81□□□□□ -0.68
Lims1Q99JW4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lims1Q99JW4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Gm12015-201ENSMUST00000117065 843 ntBASIC10.8□□□□□ -0.68
Lims1Q99JW4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Gm807-202ENSMUST00000224929 408 ntBASIC10.8□□□□□ -0.68
Lims1Q99JW4 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.8□□□□□ -0.68
Lims1Q99JW4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.8□□□□□ -0.68
Lims1Q99JW4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.8□□□□□ -0.68
Lims1Q99JW4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lims1Q99JW4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Lims1Q99JW4 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.8□□□□□ -0.68
Lims1Q99JW4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.79□□□□□ -0.68
Lims1Q99JW4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.79□□□□□ -0.68
Lims1Q99JW4 Gm45880-201ENSMUST00000213041 853 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms