Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdk9Q99J95 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdk9Q99J95 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.95□□□□□ -0.5
Cdk9Q99J95 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Rgr-203ENSMUST00000225070 4704 ntBASIC11.95□□□□□ -0.5
Cdk9Q99J95 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm14660-201ENSMUST00000119809 575 ntBASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm7029-201ENSMUST00000173226 450 ntBASIC11.95□□□□□ -0.5
Cdk9Q99J95 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm43438-201ENSMUST00000198133 379 ntBASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm44958-201ENSMUST00000203734 736 ntBASIC11.95□□□□□ -0.5
Cdk9Q99J95 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.95□□□□□ -0.5
Cdk9Q99J95 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdk9Q99J95 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdk9Q99J95 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.94□□□□□ -0.5
Cdk9Q99J95 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.94□□□□□ -0.5
Cdk9Q99J95 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Gm43818-201ENSMUST00000200605 466 ntBASIC11.94□□□□□ -0.5
Cdk9Q99J95 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.94□□□□□ -0.5
Cdk9Q99J95 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Cdk9Q99J95 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdk9Q99J95 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms