Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Gm45598-202ENSMUST00000210719 986 ntBASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb8Q91XZ2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Gm38341-201ENSMUST00000195357 515 ntBASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb8Q91XZ2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Gm44364-201ENSMUST00000198368 141 ntBASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Gm9899-201ENSMUST00000065519 555 ntBASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhb8Q91XZ2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb8Q91XZ2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb8Q91XZ2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms