Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Pcdhga3Q91XY5 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm3096-201ENSMUST00000185770 364 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm18711-201ENSMUST00000199341 750 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm35960-201ENSMUST00000202712 767 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm6334-201ENSMUST00000207083 228 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm10312-201ENSMUST00000078515 489 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Pcdhga3Q91XY5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm11930-201ENSMUST00000117788 190 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm44364-201ENSMUST00000198368 141 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 Gm45865-201ENSMUST00000211815 945 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.61□□□□□ -0.71
Pcdhga3Q91XY5 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms