Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Spred1-202ENSMUST00000110901 1440 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhb17Q91VD8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm12314-201ENSMUST00000118104 538 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm4986-201ENSMUST00000119731 549 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm13875-201ENSMUST00000120162 282 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm11597-201ENSMUST00000121423 964 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm15077-201ENSMUST00000122344 362 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm6586-201ENSMUST00000167028 643 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm18303-201ENSMUST00000190055 1176 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm3544-201ENSMUST00000196129 305 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm43049-201ENSMUST00000198099 462 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm43005-201ENSMUST00000199015 648 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 AC172989.1-201ENSMUST00000226387 513 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 AC125487.2-201ENSMUST00000219810 1300 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm42970-201ENSMUST00000196407 1352 ntBASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhb17Q91VD8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Gm37309-201ENSMUST00000194994 1639 ntBASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdhb17Q91VD8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Gm14358-201ENSMUST00000118458 403 ntBASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Gm14848-201ENSMUST00000121850 467 ntBASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Gm22552-201ENSMUST00000157796 337 ntBASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Zfp572-202ENSMUST00000184208 1078 ntBASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Mir8109-201ENSMUST00000184375 117 ntBASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Gm28335-201ENSMUST00000186204 696 ntBASIC13.02□□□□□ -0.33
Pcdhb17Q91VD8 Gm28558-201ENSMUST00000187373 696 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms