Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh18Q8VHR0 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Gm18584-201ENSMUST00000203098 964 ntBASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh18Q8VHR0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gm11439-201ENSMUST00000118598 409 ntBASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh18Q8VHR0 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms