Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx54Q8K4L0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Ddx54Q8K4L0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.47■□□□□ 0.07
Ddx54Q8K4L0 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Smok4a-201ENSMUST00000074512 1455 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm13039-201ENSMUST00000118638 794 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm13981-201ENSMUST00000122360 447 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Mir432-201ENSMUST00000157230 75 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm17221-201ENSMUST00000163909 481 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm17073-201ENSMUST00000168069 556 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm8756-201ENSMUST00000183250 929 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm6606-201ENSMUST00000193613 947 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm9204-201ENSMUST00000212641 947 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Gm9487-201ENSMUST00000216600 472 ntBASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ddx54Q8K4L0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 AC137950.2-202ENSMUST00000227150 1635 ntBASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ddx54Q8K4L0 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Gm12461-201ENSMUST00000120231 1239 ntBASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Gm14052-201ENSMUST00000121434 1031 ntBASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Gm24328-201ENSMUST00000175104 67 ntBASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Gm9625-201ENSMUST00000180422 955 ntBASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Gm37452-201ENSMUST00000194416 1160 ntBASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Gm5996-201ENSMUST00000211110 718 ntBASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 AC164437.3-201ENSMUST00000228323 347 ntBASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ddx54Q8K4L0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx54Q8K4L0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 462.6 ms