Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Gm8343-201ENSMUST00000182705 994 ntBASIC11.33□□□□□ -0.6
CroccQ8CJ40 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CroccQ8CJ40 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.32□□□□□ -0.6
CroccQ8CJ40 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Gm26361-201ENSMUST00000158868 186 ntBASIC11.32□□□□□ -0.6
CroccQ8CJ40 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.32□□□□□ -0.6
CroccQ8CJ40 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.32□□□□□ -0.6
CroccQ8CJ40 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CroccQ8CJ40 Gm23200-201ENSMUST00000104379 132 ntBASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm8199-201ENSMUST00000121323 823 ntBASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm3150-201ENSMUST00000166418 204 ntBASIC11.31□□□□□ -0.6
CroccQ8CJ40 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm37666-201ENSMUST00000194110 866 ntBASIC11.31□□□□□ -0.6
CroccQ8CJ40 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm13996-201ENSMUST00000118456 430 ntBASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm4310-201ENSMUST00000177847 889 ntBASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm27341-201ENSMUST00000183570 106 ntBASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm38117-201ENSMUST00000194653 939 ntBASIC11.31□□□□□ -0.6
CroccQ8CJ40 Gm6722-201ENSMUST00000221586 390 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms