Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup88Q8CEC0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Gm24749-201ENSMUST00000157838 343 ntBASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Gm27552-201ENSMUST00000183351 62 ntBASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Gm27844-201ENSMUST00000183613 62 ntBASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Gm45598-202ENSMUST00000210719 986 ntBASIC14.02□□□□□ -0.17
Nup88Q8CEC0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nup88Q8CEC0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm17040-202ENSMUST00000170597 889 ntBASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm43378-201ENSMUST00000199336 582 ntBASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm43947-201ENSMUST00000203019 959 ntBASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm44958-201ENSMUST00000203734 736 ntBASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.01□□□□□ -0.17
Nup88Q8CEC0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nup88Q8CEC0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Gm12286-201ENSMUST00000119246 1002 ntBASIC14□□□□□ -0.17
Nup88Q8CEC0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14□□□□□ -0.17
Nup88Q8CEC0 Gm12266-201ENSMUST00000120311 962 ntBASIC14□□□□□ -0.17
Nup88Q8CEC0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nup88Q8CEC0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms