Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc87Q8CDL9 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gm5706-201ENSMUST00000181525 993 ntBASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Rgr-203ENSMUST00000225070 4704 ntBASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc87Q8CDL9 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Gm14247-201ENSMUST00000120950 237 ntBASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Gm14999-201ENSMUST00000121039 624 ntBASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Gm21769-201ENSMUST00000211922 111 ntBASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Gm30285-201ENSMUST00000214614 422 ntBASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc87Q8CDL9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms